I would NOT want to see AutoHop expanded. Remember people are being paid to enter the skip points manually so expanding AutoHop would add cost to everyone's service whether they used the feature or not. In fact, I'd like to see AutoHop a separate feature you could enable for $$$ and be a savings to the rest of us. I use AutoHop occasionally but I've gotten so used to hitting skip 8-10 times (as required) to skip breaks that it's hardly a necessary feature for me.
As others have said, my biggest wish is for Hopper to simply work properly with all the features Dish has promised.
One thing I would like to see is an expansion of the DVR storage that does not require manual transfers. External storage should simply become an extension to the internal drive and available to DishAnywhere. You should not need to switch between internal and external storage to brows available recordings. If this all works properly, how large the external storage is becomes insignificant since if you want more storage, you simply add more external drives. Storage redundancy is also an important issue. If the receiver or internal drive dies, you should not loose programming. Redundant external drives that mirror what's on other drives (including the internal) would virtually eliminate loss of content on a crash. While not supported, a Raid 1 (mirrored storage) external enclosure works perfectly on Dish receivers. That's sufficient except for the internal which also needs redundancy unless there is a way to instruct the receiver to immediately move recordings to external storage when the recording is finished (or allow recording directly to the external).